Mounting a copy of a MySQL data-directory in Docker
A customer called this morning, they had deleted a large part of their records in the database, can you please restore them?
Oh yeah, and don't touch the current records as we have made sales this morning.
The instance runs under ProxMox and is daily backuped to the Proxmox Backup Server.
I downloaded the
/etc/mysql as a
zip to my machine, and unzipped them in a working directory.
Initially I tried to run this using docker:
docker run --rm -v $(pwd)/mysql:/var/lib/mysql -v $(pwd)/conf:/etc/mysql mysql:8.0
Sadly this failed with:
2023-10-05T12:38:43.399765Z 0 [System] [MY-010116] [Server] /usr/sbin/mysqld (mysqld 8.0.34) starting as process 1 2023-10-05T12:38:43.403373Z 0 [Warning] [MY-010159] [Server] Setting lower_case_table_names=2 because file system for /var/lib/mysql/ is case insensitive 2023-10-05T12:38:43.412236Z 1 [System] [MY-013576] [InnoDB] InnoDB initialization has started. 2023-10-05T12:38:44.351480Z 1 [System] [MY-013577] [InnoDB] InnoDB initialization has ended. 2023-10-05T12:38:44.366718Z 1 [ERROR] [MY-011087] [Server] Different lower_case_table_names settings for server ('2') and data dictionary ('0'). 2023-10-05T12:38:44.366834Z 0 [ERROR] [MY-010020] [Server] Data Dictionary initialization failed. 2023-10-05T12:38:44.366843Z 0 [ERROR] [MY-010119] [Server] Aborting 2023-10-05T12:38:44.958349Z 0 [System] [MY-010910] [Server] /usr/sbin/mysqld: Shutdown complete (mysqld 8.0.34) MySQL Community Server - GPL.
This is caused by my machine being MacOS and the original server being a Linux, Linux has a case-sensitive filesystem, Mac does not by default.
To resolve this you can create a sparse-file that has a case-sensitive filesystem and mount it.
hdiutil create -type SPARSE -fs hfsx -size 4g -volname linux linux.hfsx.dmg.sparseimage hdiutil attach -nobrowse -mountpoint linux linux.hfsx.dmg.sparseimage
Now move the unzipped data into this linux folder, and try again.
docker run -v $(pwd)/linux:/var/lib/mysql -v $(pwd)/conf:/etc/mysql --name mysql mysql:8.0
This works, now you can access your database again.
After you've finished, stop docker and eject.
docker stop mysql hdiutil eject linux
And finally, delete the sparse file.
To restore the data, we exported the 2 tables to new tables and re-added the recors with a
select into from the old where the id's were missing.
A happy customer!